Every age has had its emerging infectious diseases. Microbes and the diseases they cause are organized here by the era that they first emerged as a major threat to human populations. Some of them like malaria have been major pathogens since they emerged in the depths of Antiquity (or before). Others have come and gone, and some are still in their first emergence. All of them are interesting for our understanding of history and are still relevant for our future.
Paleomicrobiology
- Old Germs, or Paleomicrobiology
- Tools of Paleomicrobiology
- Hunting Pathogens in Siberian Permafrost Graves
- Ancient Remnants: Biomolecules in Paleomicrobiology (non-nucleic acid)
Antiquity (before c. 400 AD/CE)
Anthrax
Malaria (Plasmodium species)
- Malaria and the Boy Pharaoh
- Benjamin Rush on Malaria in Pennsylvania, 1785
- A Reversal of Seasons
- Mapping Malaria, Smallpox, and Leprosy
Trench Fever (Bartonella quintana, 4000 BP)
- Detecting pathogens in medieval Venice
- Trench Fever and Plague in 14th Century France
- Lice, Ancient DNA, and Napoleon’s Grand Army
- Trench Fever in German Mass Burial
Smallpox
Medieval (c. 400-1400 AD/CE)
The Plague (Yersinia pestis, first pandemic 541 AD/CE)
- See the Plague page here at Contagions!
- Plague DNA from Late Antique Bavaria
- The Vampire in the Plague Pit
- Plague in 18th century Egypt
- Detecting pathogens in medieval Venice
- DNA of the Black Death from East Smithfield, London
Measles (11th-12th century)
Modern (1400-present)
Influenza (first pandemic 1510)
- Influenza Pandemics: 1510-2010
- Epidemiology of the Russian Flu, 1889-1890
- Insights into the Pathogenesis of the Spanish Flu
- Defining pandemic

